Cabana_SiloParticleOutput.hpp File Reference

Write particle output using the Silo format. More...

#include <Kokkos_Core.hpp>
#include <Kokkos_Profiling_ScopedRegion.hpp>
#include <Cabana_Slice.hpp>
#include <silo.h>
#include <mpi.h>
#include <pmpio.h>
#include <sstream>
#include <string>
#include <type_traits>
#include <vector>

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Namespaces
namespace	Cabana
	Core: particle data structures and algorithms.

Functions
template<class SliceType>
void	Cabana::Experimental::writeFields (DBfile *silo_file, const std::string &mesh_name, const std::size_t begin, const std::size_t end, const SliceType &slice)
	Write particle data to Silo output.
template<class SliceType, class... FieldSliceTypes>
void	Cabana::Experimental::writeFields (DBfile *silo_file, const std::string &mesh_name, const std::size_t begin, const std::size_t end, const SliceType &slice, FieldSliceTypes &&... fields)
	Write particle data to Silo output.
void *	Cabana::Experimental::createFile (const char *file_name, const char *dir_name, void *user_data)
	Create Silo output file.
void *	Cabana::Experimental::openFile (const char *file_name, const char *dir_name, PMPIO_iomode_t io_mode, void *user_data)
	Open Silo output file.
void	Cabana::Experimental::closeFile (void *file, void *user_data)
	Close Silo output file.
template<class... FieldSliceTypes>
std::vector< std::string >	Cabana::Experimental::getFieldNames (FieldSliceTypes &&... fields)
	Get Silo output property field names.
template<class... FieldSliceTypes>
void	Cabana::Experimental::writeMultiMesh (PMPIO_baton_t *baton, DBfile *silo_file, const int comm_size, const std::string &prefix, const std::string &mesh_name, const int time_step_index, const double time, FieldSliceTypes &&... fields)
	Write a Silo multimesh hierarchy.
template<class CoordSliceType, class... FieldSliceTypes>
void	Cabana::Experimental::writePartialRangeTimeStep (const std::string &prefix, MPI_Comm comm, const int num_group, const int time_step_index, const double time, const std::size_t begin, const std::size_t end, const CoordSliceType &coords, FieldSliceTypes &&... fields)
	Write particle output in Silo format.
template<class CoordSliceType, class... FieldSliceTypes>
void	Cabana::Experimental::writeTimeStep (const std::string &prefix, MPI_Comm comm, const int num_group, const int time_step_index, const double time, const CoordSliceType &coords, FieldSliceTypes &&... fields)
	Write output in Silo format for all particles.

Detailed Description

Write particle output using the Silo format.

Function Documentation

writePartialRangeTimeStep()

template<class CoordSliceType, class... FieldSliceTypes>

void Cabana::Experimental::writePartialRangeTimeStep	(	const std::string &	prefix,
		MPI_Comm	comm,
		const int	num_group,
		const int	time_step_index,
		const double	time,
		const std::size_t	begin,
		const std::size_t	end,
		const CoordSliceType &	coords,
		FieldSliceTypes &&...	fields )

Write particle output in Silo format.

Parameters

prefix	Filename prefix.
comm	MPI communicator.
num_group	Number of files to create in parallel.
time_step_index	Current simulation step index.
time	Current simulation time.
begin	The first particle index to output.
end	The final particle index to output.
coords	Particle coordinates.
fields	Variadic list of particle property fields.

writeTimeStep()

template<class CoordSliceType, class... FieldSliceTypes>

void Cabana::Experimental::writeTimeStep	(	const std::string &	prefix,
		MPI_Comm	comm,
		const int	num_group,
		const int	time_step_index,
		const double	time,
		const CoordSliceType &	coords,
		FieldSliceTypes &&...	fields )

Write output in Silo format for all particles.

Parameters

prefix	Filename prefix.
comm	MPI communicator.
num_group	Number of files to create in parallel.
time_step_index	Current simulation step index.
time	Current simulation time.
coords	Particle coordinates.
fields	Variadic list of particle property fields.