Sparse index space, with a hierarchical structure (cell->tile->block) More...

#include <Cabana_Grid_SparseIndexSpace.hpp>

Public Types
using	key_type = Key
	Tile hash key type.

using	value_type = Value
	Tile number type.

using	memory_space = MemorySpace
	memory space

Public Member Functions
	SparseMap (const std::array< int, rank > size, const unsigned int pre_alloc_size)
	(Host) Constructor

KOKKOS_INLINE_FUNCTION void	insertCell (int cell_i, int cell_j, int cell_k) const
	(Device) Insert a cell

KOKKOS_INLINE_FUNCTION void	insertTile (int tile_i, int tile_j, int tile_k) const
	(Device) Insert a tile (to hash table); Note that the tile ijk should be global

KOKKOS_INLINE_FUNCTION value_type	queryTile (int cell_i, int cell_j, int cell_k) const
	(Device) Query the 1D tile key from the 3D cell ijk

KOKKOS_INLINE_FUNCTION value_type	queryTileFromTileId (const int tile_i, const int tile_j, const int tile_k) const
	(Device) Query the 1D tile key from the 3D tile ijk

KOKKOS_INLINE_FUNCTION value_type	queryTileFromTileKey (const key_type tile_key) const
	(Device) Query the 1D tile key from the 1D tile key

KOKKOS_INLINE_FUNCTION value_type	queryCell (int cell_i, int cell_j, int cell_k) const
	(Device) Query the 1D cell key from the 3D cell ijk

void	clear ()
	(Host) Clear tile hash table (required by unordered map clear())

bool	reserve (const value_type capacity)
	(Host) Set new capacity lower bound on the unordered map

KOKKOS_INLINE_FUNCTION uint32_t	capacity () const
	(Host/Device) Require capacity of the index hash table

value_type	size () const
	(Host) Valid tile number inside current block (MPI rank)

value_type	sizeTile () const
	(Host) Valid tile number inside current block (MPI rank)

value_type	sizeCell () const
	(Host) Valid cell number inside current block (MPI rank)

template<typename T>
value_type	reservedTileSize (T factor) const
	(Host) Reserved tile number inside current block (MPI rank)

template<typename T>
value_type	reservedCellSize (T factor) const
	(Host) Reserved cell number inside current block (MPI rank)

KOKKOS_INLINE_FUNCTION bool	valid_at (uint32_t index) const
	(Device) Valid block at index

KOKKOS_INLINE_FUNCTION bool	isValidKey (key_type key) const
	(Device) Check if the tile key is valid.

KOKKOS_INLINE_FUNCTION key_type	key_at (uint32_t index) const
	(Device) Get block key at index

KOKKOS_INLINE_FUNCTION value_type	value_at (uint32_t index) const
	(Device) get tile id value at index

KOKKOS_INLINE_FUNCTION void	key2ijk (key_type &key, int &tile_i, int &tile_j, int &tile_k) const
	(Device) Transfer tile hash key to tile ijk

KOKKOS_INLINE_FUNCTION key_type	ijk2key (int tile_i, int tile_j, int tile_k) const
	(Device) Transfer tile ijk to til key

KOKKOS_INLINE_FUNCTION value_type	cell_local_id (const int cell_i, const int cell_j, const int cell_k) const
	(Device) Get local cell ID from cell IJK

Static Public Attributes
static constexpr int	rank = 3
	Number of dimensions, 3 = ijk.

static constexpr unsigned long long	cell_bits_per_tile_dim
	Number of bits (per dimension) needed to index the cells inside a tile.

static constexpr unsigned long long	cell_num_per_tile_dim

static constexpr unsigned long long	cell_mask_per_tile_dim

static constexpr unsigned long long	cell_bits_per_tile
	Number of bits (total) needed to index the cells inside a tile.

static constexpr unsigned long long	cell_mask_per_tile
	Cell mask (combine all dimensions dimension)

static constexpr unsigned long long	cell_num_per_tile
	Number of cells (total) inside each tile.

static constexpr HashTypes	hash_type = Hash
	Hash table type.

Detailed Description

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>
class Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >

Sparse index space, with a hierarchical structure (cell->tile->block)

Template Parameters

MemorySpace	Memory space to store the Map(Hash Table)
CellPerTileDim	Cell number inside each tile per dimension
Hash	Hash type (lexicographical or morton)
Key	Type of the tile/cell hash key
Value	Type of the tile/cell No.

Constructor & Destructor Documentation

◆ SparseMap()

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::SparseMap	(	const std::array< int, rank >	size,
		const unsigned int	pre_alloc_size )

inline

(Host) Constructor

Parameters

size	The size of the block (MPI rank) (Unit: cell)
pre_alloc_size	Expected capacity of the allocator to store the tiles when tile nums exceed the capacity

Member Function Documentation

◆ cell_local_id()

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

KOKKOS_INLINE_FUNCTION value_type Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::cell_local_id	(	const int	cell_i,
		const int	cell_j,
		const int	cell_k ) const

inline

(Device) Get local cell ID from cell IJK

Parameters

cell_i,cell_j,cell_k Cell ID in each dimension (both local and global IJK work)

◆ ijk2key()

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

KOKKOS_INLINE_FUNCTION key_type Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::ijk2key	(	int	tile_i,
		int	tile_j,
		int	tile_k ) const

inline

(Device) Transfer tile ijk to til key

Parameters

tile_i,tile_j,tile_k Tile ID in each dimension

Returns: tile hash key

◆ insertCell()

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

KOKKOS_INLINE_FUNCTION void Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::insertCell	(	int	cell_i,
		int	cell_j,
		int	cell_k ) const

inline

(Device) Insert a cell

Parameters

cell_i,cell_j,cell_k Cell ID in each dimension

Given a cell ijk, insert the tile where the cell reside in to hash table; Note that the ijk should be global

◆ insertTile()

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

KOKKOS_INLINE_FUNCTION void Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::insertTile	(	int	tile_i,
		int	tile_j,
		int	tile_k ) const

inline

(Device) Insert a tile (to hash table); Note that the tile ijk should be global

Parameters

tile_i,tile_j,tile_k Tile ID in each dimension

◆ isValidKey()

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

KOKKOS_INLINE_FUNCTION bool Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::isValidKey ( key_type key ) const

inline

(Device) Check if the tile key is valid.

Parameters

key	tile key to check

◆ key2ijk()

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

KOKKOS_INLINE_FUNCTION void Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::key2ijk	(	key_type &	key,
		int &	tile_i,
		int &	tile_j,
		int &	tile_k ) const

inline

(Device) Transfer tile hash key to tile ijk

Parameters

key	Tile hash key
tile_i,tile_j,tile_k	Tile ID in each dimension

◆ key_at()

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

KOKKOS_INLINE_FUNCTION key_type Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::key_at ( uint32_t index ) const

inline

(Device) Get block key at index

Parameters

index index number in Kokkos unordered_map

◆ queryCell()

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

KOKKOS_INLINE_FUNCTION value_type Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::queryCell	(	int	cell_i,
		int	cell_j,
		int	cell_k ) const

inline

(Device) Query the 1D cell key from the 3D cell ijk

Parameters

cell_i,cell_j,cell_k Cell ID in each dimension

◆ queryTile()

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

KOKKOS_INLINE_FUNCTION value_type Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::queryTile	(	int	cell_i,
		int	cell_j,
		int	cell_k ) const

inline

(Device) Query the 1D tile key from the 3D cell ijk

Parameters

cell_i,cell_j,cell_k Cell ID in each dimension

◆ queryTileFromTileId()

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

KOKKOS_INLINE_FUNCTION value_type Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::queryTileFromTileId	(	const int	tile_i,
		const int	tile_j,
		const int	tile_k ) const

inline

(Device) Query the 1D tile key from the 3D tile ijk

Parameters

tile_i,tile_j,tile_k Tile ID in each dimension

◆ queryTileFromTileKey()

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

KOKKOS_INLINE_FUNCTION value_type Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::queryTileFromTileKey ( const key_type tile_key ) const

inline

(Device) Query the 1D tile key from the 1D tile key

Parameters

tile_key 1D tile key

◆ reserve()

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

bool Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::reserve ( const value_type capacity )

inline

(Host) Set new capacity lower bound on the unordered map

Parameters

capacity New capacity lower bound

◆ reservedCellSize()

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

template<typename T>

value_type Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::reservedCellSize ( T factor ) const

inline

(Host) Reserved cell number inside current block (MPI rank)

Parameters

factor scale up the real size as reserved space

◆ reservedTileSize()

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

template<typename T>

value_type Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::reservedTileSize ( T factor ) const

inline

(Host) Reserved tile number inside current block (MPI rank)

Parameters

factor scale up the real size as reserved space

◆ valid_at()

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

KOKKOS_INLINE_FUNCTION bool Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::valid_at ( uint32_t index ) const

inline

(Device) Valid block at index

Parameters

index index number in Kokkos unordered_map

◆ value_at()

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

KOKKOS_INLINE_FUNCTION value_type Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::value_at ( uint32_t index ) const

inline

(Device) get tile id value at index

Parameters

index index value in kokkos unordered map

Member Data Documentation

◆ cell_bits_per_tile

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

unsigned long long Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::cell_bits_per_tile

staticconstexpr

Initial value:

=
        cell_bits_per_tile_dim + cell_bits_per_tile_dim +
        cell_bits_per_tile_dim

Number of bits (total) needed to index the cells inside a tile.

◆ cell_bits_per_tile_dim

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

unsigned long long Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::cell_bits_per_tile_dim

staticconstexpr

Initial value:

=

bitCount( CellPerTileDim )

Cabana::Grid::bitCount

KOKKOS_INLINE_FUNCTION constexpr Integer bitCount(Integer input_int) noexcept

(Host/Device) Compute the lease bit number needed to index input integer

Definition Cabana_Grid_SparseIndexSpace.hpp:80

Number of bits (per dimension) needed to index the cells inside a tile.

◆ cell_mask_per_tile

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

unsigned long long Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::cell_mask_per_tile

staticconstexpr

Initial value:

=

( 1 << cell_bits_per_tile ) - 1

Cabana::Grid::SparseMap::cell_bits_per_tile

static constexpr unsigned long long cell_bits_per_tile

Number of bits (total) needed to index the cells inside a tile.

Definition Cabana_Grid_SparseIndexSpace.hpp:428

Cell mask (combine all dimensions dimension)

◆ cell_mask_per_tile_dim

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

unsigned long long Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::cell_mask_per_tile_dim

staticconstexpr

Initial value:

=

( 1 << cell_bits_per_tile_dim ) - 1

Cell mask (per dimension), indicating which part of the tile address(binary bits) will index the cells inside each tile

◆ cell_num_per_tile

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

unsigned long long Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::cell_num_per_tile

staticconstexpr

Initial value:

=

cell_num_per_tile_dim * cell_num_per_tile_dim * cell_num_per_tile_dim

Cabana::Grid::SparseMap::cell_num_per_tile_dim

static constexpr unsigned long long cell_num_per_tile_dim

Definition Cabana_Grid_SparseIndexSpace.hpp:421

Number of cells (total) inside each tile.

◆ cell_num_per_tile_dim

template<typename MemorySpace, unsigned long long CellPerTileDim = 4, HashTypes Hash = HashTypes::Naive, typename Key = uint64_t, typename Value = uint64_t>

unsigned long long Cabana::Grid::SparseMap< MemorySpace, CellPerTileDim, Hash, Key, Value >::cell_num_per_tile_dim

staticconstexpr

Initial value:

=

1 << cell_bits_per_tile_dim

Cabana::Grid::SparseDimPartitioner::cell_bits_per_tile_dim

static constexpr unsigned long long cell_bits_per_tile_dim

Number of bits (per dimension) needed to index the cells inside a tile.

Definition Cabana_Grid_SparseDimPartitioner.hpp:70

Number of cells inside each tile (per dimension), tile size reset to power of 2

The documentation for this class was generated from the following file:

grid/src/Cabana_Grid_SparseIndexSpace.hpp

Public Types

Public Member Functions

Static Public Attributes

Detailed Description

Constructor & Destructor Documentation

◆ SparseMap()

Member Function Documentation

◆ cell_local_id()

◆ ijk2key()

◆ insertCell()

◆ insertTile()

◆ isValidKey()

◆ key2ijk()

◆ key_at()

◆ queryCell()

◆ queryTile()

◆ queryTileFromTileId()

◆ queryTileFromTileKey()

◆ reserve()

◆ reservedCellSize()

◆ reservedTileSize()

◆ valid_at()

◆ value_at()

Member Data Documentation

◆ cell_bits_per_tile

◆ cell_bits_per_tile_dim

◆ cell_mask_per_tile

◆ cell_mask_per_tile_dim

◆ cell_num_per_tile

◆ cell_num_per_tile_dim